Matthew J. Walter, M.D.

Matt Walter
  • Assistant Professor
    • Department of Medicine
      • Oncology Division
        • Stem Cell Biology Section
    • Department of Genetics
  • Clinical interests
    • Myelodysplastic syndromes
    • Acute myeloid leukemia
  • Research interests
    • Functional genomics
    • Tumor biology
    • Hematopoiesis

Research

The main interest of our laboratory is the discovery and characterization of gene mutations in patients with myelodysplastic syndrome (MDS) with the long term goal of understanding the molecular mechanisms that control abnormal hematopoiesis. MDS results from the expansion of one or more dominant hematopoietic clones that contain initiating mutations, while transformation from MDS to acute myeloid leukemia (AML) occurs as these clones accumulate additional progression factors (including point mutations in genes and cytogenetic abnormalities).

Current projects include the following:

Discovery of gene mutations that occur in the genomes of hematopoietic cells from patients with myelodysplastic syndromes (MDS)

Our laboratory is using high-throughput genomic resequencing to analyze candidate genes that may be important for the pathogenesis of MDS. Functional studies of mutant genes will be performed to understand how the normal and abnormal gene products affect hematopoiesis.

Characterization of genomic copy number alterations in MDS

Small chromosomal abnormalities, undetectable by standard cytogenetic analysis, may contribute directly to MDS pathogenesis. To address this possibility, we are using an array comparative genomic hybridization (aCGH) platform that contains ~385,000 long oligomer probes spanning the entire genome with 6 kilobase average spacing. This platform can detect cytogenetically "silent" copy number changes in the genomes of hematopoietic cells from MDS patients. We are annotating the genes encompassed by these copy number changes and evaluating their contribution to MDS pathogenesis using both mouse models systems and primary human cells.

Define the molecular mechanisms that control abnormal hematopoiesis in MDS

Several genes located on a chromosomal region that is commonly deleted in MDS have been implicated in hematopoiesis. The laboratory is utilizing RNA interference (RNAi) in primary human and murine hematopoietic cells to study how gene dosage alters hematopoiesis. Knockout mice are being generated for specific MDS candidate genes in order to directly study their contribution to hematopoiesis in mice.

CNA

Summary of genetic alterations in AML genomes

Pie chart demonstrates the relative proportions of AML samples with an abnormal (red, n = 50) and normal (white, n = 36) karyotype, with (+) and without (-) copy number alterations (CNAs) and uniparental disomy (UPD) detected by SNP arrays. The number of patients in each group is listed in parentheses. Of 36 patients with a normal karyotype, 13 (36%) had a CNA or UPD (identified as SNP Array Specific CNA or UPD). Of 50 patients with an abnormal karyotype, 21 (42%) had an SNP array-specific CNA (not seen by cytogenetics) or UPD detected by SNP arrays (identified as SNP Array Specific CNA or UPD). Forty-three of 86 patients (50%) had no CNA or UPD detected by SNP arrays.

From: Walter MJ, Payton JE, Ries RE, et al.
Acquired copy number alterations in adult acute myeloid leukemia genomes.
Proc Natl Acad Sci U S A 2009 Aug 4;106(31):12950-5

Biographical Sketch

Education

1990 B.S., American University, Washington, DC
1995 M.D., St. Louis University School of Medicine, St. Louis, MO

Post-graduate Training

1992-1993 Howard Hughes Medical Institute - National Institutes of Health Research Scholar, Bethesda, MD (Steven Jacobson, PhD, Mentor)
1995-1996 Intern in Medicine, Johns Hopkins Hospital, Baltimore, MD
1996-1998 Resident in Medicine, Johns Hopkins Hospital, Baltimore, MD
1998-1999 Hematology-Oncology Fellow, Washington University Medical Center, St. Louis, MO
1999-2000 Assistant Chief of Service (Chief Medical Resident), Johns Hopkins Hospital, Baltimore, MD
2000-2004 Hematology-Oncology Fellow, Washington University Medical Center, St. Louis, MO
2001-2004 Post-Doctoral Fellow, Washington University, St. Louis, MO (Timothy Ley, MD, Mentor)

Academic Positions

2004-2005 Instructor of Medicine, Washington University School of Medicine, St. Louis, MO
2005-present Assistant Professor of Medicine, Washington University School of Medicine, St. Louis, MO
2005-present Assistant Professor of Genetics, Washington University School of Medicine, St. Louis, MO

Board Certification

1998 American Board of Internal Medicine
2002 American Board of Internal Medicine, Oncology
2002 American Board of Internal Medicine, Hematology

Honors & Awards

1991 Eben J. Carey Memorial Award in Anatomy, St. Louis University School of Medicine
1991-1992 American Federation for Aging Research Fellow, Research Scholarship in Geriatric Pharmacology, St. Louis University School of Medicine, St. Louis, MO
1991-1992 Hartford Fellow, John A. Hartford Foundation for Geriatric Research, St. Louis University School of Medicine, St. Louis, MO
1992-1993 Howard Hughes Medical Institute - National Institutes of Health Research Scholar, Bethesda, MD
1994 Alpha Omega Alpha Honor Medical Society, St. Louis University School of Medicine
1995 Medical Degree with Distinction in Research, St. Louis University School of Medicine
2003-2004 Leukemia Research Foundation Physician-Scientist Postdoctoral Fellowship
2003-present NHLBI Loan Repayment Program recipient
2005-2007 American Society of Hematology Scholar Award
2007-2012 Howard Hughes Medical Institute Physician-Scientist Early Career Award

Professional Societies

American Society of Hematology